Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucokinase | SAMEA3472147_00023 | Not Available | Negative | 26996 - 27961 | 34702.1 |
| putative voltage gated chloride channel protein | SAMEA3472147_00024 | Not Available | Positive | 28165 - 29421 | 43576.4 |
| protein | SAMEA3472147_00025 | Not Available | Positive | 29536 - 29862 | 13263.4 |
| manganese transport protein | SAMEA3472147_00026 | Not Available | Negative | 30003 - 31241 | 44196.5 |
| nucleoside permease nupc | SAMEA3472147_00027 | Not Available | Positive | 31577 - 32779 | 43478.4 |
| putative diguanylate cyclase | SAMEA3472147_00028 | Not Available | Negative | 32829 - 35018 | 83617.2 |
| Trna-ala | Not Available | Not Available | Positive | 35226 - 35301 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 35341 - 35416 | Not Available |
| putative dna-binding transcriptional regulator | SAMEA3472147_00031 | Not Available | Positive | 35637 - 35996 | 13412.3 |
| putative regulatory protein | SAMEA3472147_00032 | Not Available | Positive | 36019 - 36390 | 13947.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





