Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein ycdr | SAMEA3472147_03555 | Not Available | Negative | 3699251 - 3701269 | 77329.8 |
| outer membrane protein pgaa | SAMEA3472147_03556 | Not Available | Negative | 3701278 - 3703701 | 92419.1 |
| putative diguanylate cyclase | SAMEA3472147_03557 | Not Available | Positive | 3704290 - 3705648 | 51676.5 |
| rtn-like protein | SAMEA3472147_03558 | Not Available | Positive | 3705861 - 3707321 | 54646.5 |
| fidl-like protein | SAMEA3472147_03559 | Not Available | Negative | 3707459 - 3707959 | 19383.2 |
| transcriptional regulator | SAMEA3472147_03560 | Not Available | Negative | 3707964 - 3708488 | 20163.6 |
| quinone oxidoreductase, nadph-dependent | SAMEA3472147_03561 | Not Available | Negative | 3708830 - 3709204 | 13015.5 |
| replicative dna helicase | SAMEA3472147_03562 | Not Available | Positive | 3709287 - 3710702 | 52393.1 |
| alanine racemase | SAMEA3472147_03563 | Not Available | Positive | 3710755 - 3711834 | 39183.3 |
| aromatic amino acid aminotransferase | SAMEA3472147_03564 | Not Available | Positive | 3712087 - 3713280 | 43479.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





