Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | SAMEA3472147_03545 | Not Available | Negative | 3683917 - 3687879 | 143760.0 |
| sodium/proline symporter (proline permease) | SAMEA3472147_03546 | Not Available | Positive | 3688301 - 3689809 | 54359.4 |
| uncharacterised protein | SAMEA3472147_03547 | Not Available | Negative | 3689958 - 3691286 | 50274.5 |
| uncharacterised protein | SAMEA3472147_03548 | Not Available | Negative | 3692285 - 3692431 | 5999.12 |
| ferrous iron permease | SAMEA3472147_03549 | Not Available | Positive | 3692467 - 3693297 | 30433.8 |
| inactive ferrous ion transporter periplasmic protein efeo | SAMEA3472147_03550 | Not Available | Positive | 3693355 - 3694482 | 41153.9 |
| putative peroxidase | SAMEA3472147_03551 | Not Available | Positive | 3694488 - 3695759 | 46669.7 |
| protein phoh (phosphate starvation-inducible protein) | SAMEA3472147_03552 | Not Available | Positive | 3696404 - 3697468 | 39331.1 |
| pga biosynthesis protein | SAMEA3472147_03553 | Not Available | Negative | 3697518 - 3697931 | 16110.7 |
| n-glycosyltransferase | SAMEA3472147_03554 | Not Available | Negative | 3697933 - 3699258 | 50768.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





