Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute-binding periplasmic protein | SAMEA3472147_03525 | Not Available | Positive | 3666361 - 3667389 | 37900.0 |
| two-component response regulator | SAMEA3472147_03526 | Not Available | Negative | 3667362 - 3668054 | 26270.9 |
| cytochrome c-type protein torc | SAMEA3472147_03527 | Not Available | Positive | 3668184 - 3669356 | 43587.9 |
| trimethylamine-n-oxide reductase precursor | SAMEA3472147_03528 | Not Available | Positive | 3669356 - 3671902 | 94509.1 |
| chaperone protein tord | SAMEA3472147_03529 | Not Available | Positive | 3671899 - 3672498 | 22535.8 |
| chaperone-modulator protein | SAMEA3472147_03530 | Not Available | Negative | 3672591 - 3672896 | 11512.9 |
| curved dna-binding protein | SAMEA3472147_03531 | Not Available | Negative | 3672896 - 3673816 | 34456.9 |
| ycce | SAMEA3472147_03532 | Not Available | Positive | 3674077 - 3675333 | 47865.3 |
| glucose-1-phosphatase | SAMEA3472147_03533 | Not Available | Positive | 3675626 - 3676867 | 45698.4 |
| putative cytoplasmic protein yccj | SAMEA3472147_03534 | Not Available | Negative | 3676905 - 3677132 | 8524.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





