Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aldose 1-epimerase | SAMEA3472147_03513 | Not Available | Negative | 3654011 - 3654895 | 32686.8 |
| glyceraldehyde 3-phosphate dehydrogenase a | SAMEA3472147_03514 | Not Available | Negative | 3654979 - 3655974 | 35534.5 |
| methionine sulfoxide reductase b | SAMEA3472147_03515 | Not Available | Positive | 3656316 - 3656729 | 15452.0 |
| putative cytoplasmic protein | SAMEA3472147_03516 | Not Available | Positive | 3656771 - 3657043 | 10274.4 |
| zinc-type alcohol dehydrogenase-like protein ydjl | SAMEA3472147_03517 | Not Available | Positive | 3657413 - 3658489 | 38782.0 |
| major facilitator superfamily protein | SAMEA3472147_03518 | Not Available | Positive | 3658516 - 3659949 | 51957.9 |
| inner membrane protein | SAMEA3472147_03520 | Not Available | Negative | 3660317 - 3660622 | 9447.98 |
| protein gnsa | SAMEA3472147_03522 | Not Available | Positive | 3662168 - 3662341 | 6575.99 |
| putative electron transport protein | SAMEA3472147_03523 | Not Available | Negative | 3662389 - 3663462 | 40007.3 |
| hybrid sensory histidine kinase tors | SAMEA3472147_03524 | Not Available | Negative | 3663534 - 3666233 | 99001.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





