Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | SAMEA3472147_03460 | Not Available | Positive | 3598481 - 3600247 | 64372.5 |
| succinate dehydrogenase | SAMEA3472147_03461 | Not Available | Positive | 3600263 - 3600979 | 26843.4 |
| 2-oxoglutarate dehydrogenase e1 component | SAMEA3472147_03462 | Not Available | Positive | 3601280 - 3604081 | 105068.0 |
| dihydrolipoamide succinyltransferase component (e2) | SAMEA3472147_03463 | Not Available | Positive | 3604096 - 3605313 | 44060.0 |
| succinyl-coa synthetase beta chain with atp-grasp domain | SAMEA3472147_03464 | Not Available | Positive | 3605498 - 3606664 | 41395.1 |
| succinyl-coa ligase subunit alpha | SAMEA3472147_03465 | Not Available | Positive | 3606664 - 3607533 | 29779.3 |
| iclr-family transcriptional regulator | SAMEA3472147_03466 | Not Available | Positive | 3608418 - 3609209 | 29998.1 |
| protein | SAMEA3472147_03467 | Not Available | Negative | 3609353 - 3609592 | 8514.67 |
| protein | SAMEA3472147_03468 | Not Available | Positive | 3609969 - 3610256 | 10807.1 |
| ribosomal rna large subunit methyltransferase a | SAMEA3472147_03470 | Not Available | Positive | 3611456 - 3612265 | 30466.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





