Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease viii (dna glycosylase/ap lyase nei) | SAMEA3472147_03450 | Not Available | Positive | 3588522 - 3589313 | 29812.8 |
| transport protein abrb | SAMEA3472147_03451 | Not Available | Negative | 3589310 - 3590356 | 36886.1 |
| fimbrial-like adhesin protein | SAMEA3472147_03452 | Not Available | Negative | 3590505 - 3591566 | 39665.9 |
| periplasmic pilus chaperone family protein | SAMEA3472147_03453 | Not Available | Negative | 3591563 - 3592294 | 27502.2 |
| fimbrial usher protein | SAMEA3472147_03454 | Not Available | Negative | 3592309 - 3594747 | 89704.9 |
| fimbrial-like protein | SAMEA3472147_03455 | Not Available | Negative | 3594806 - 3595372 | 19960.5 |
| citrate synthase | SAMEA3472147_03456 | Not Available | Negative | 3595759 - 3597042 | 47984.6 |
| uncharacterised protein | SAMEA3472147_03457 | Not Available | Negative | 3597248 - 3597355 | 3827.66 |
| succinate dehydrogenase cytochrome b556 large membrane subunit | SAMEA3472147_03458 | Not Available | Positive | 3597736 - 3598140 | 14900.8 |
| succinate dehydrogenase hydrophobic membrane anchor protein | SAMEA3472147_03459 | Not Available | Positive | 3598134 - 3598481 | 12868.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





