Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit a | SAMEA3472147_03440 | Not Available | Negative | 3579198 - 3580871 | 59145.8 |
| protein | SAMEA3472147_03441 | Not Available | Positive | 3581272 - 3581478 | 8275.0 |
| photoreactivation-associated protein | SAMEA3472147_03442 | Not Available | Positive | 3581580 - 3582089 | 20191.3 |
| deoxyribodipyrimidine photolyase, fad-binding | SAMEA3472147_03443 | Not Available | Positive | 3582086 - 3583504 | 53711.0 |
| putative oligopeptide transporter | SAMEA3472147_03444 | Not Available | Negative | 3583654 - 3585135 | 54134.1 |
| hydrolase-oxidase | SAMEA3472147_03445 | Not Available | Positive | 3585406 - 3586149 | 26894.0 |
| putative allophanate hydrolase subunit 1 | SAMEA3472147_03446 | Not Available | Positive | 3586172 - 3586828 | 23978.0 |
| putative allophanate hydrolase subunit 2 | SAMEA3472147_03447 | Not Available | Positive | 3586822 - 3587478 | 23680.8 |
| putative allophanate hydrolase subunit 2 | SAMEA3472147_03448 | Not Available | Positive | 3587448 - 3587762 | 11890.4 |
| lamb/ycsf-family protein | SAMEA3472147_03449 | Not Available | Positive | 3587752 - 3588486 | 25896.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





