Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric uptake regulation protein | SAMEA3472147_03430 | Not Available | Negative | 3568034 - 3568480 | 16795.8 |
| flavodoxin 1 | SAMEA3472147_03431 | Not Available | Negative | 3568769 - 3569299 | 19737.9 |
| lexa regulated protein | SAMEA3472147_03432 | Not Available | Negative | 3569439 - 3569801 | 13873.9 |
| putative esterase/lipase | SAMEA3472147_03433 | Not Available | Negative | 3569872 - 3570636 | 28464.9 |
| negative modulator of initiation of replication | SAMEA3472147_03434 | Not Available | Positive | 3570821 - 3571366 | 20332.6 |
| phosphoglucomutase | SAMEA3472147_03435 | Not Available | Positive | 3571392 - 3573032 | 58382.2 |
| two-component response regulator | SAMEA3472147_03436 | Not Available | Negative | 3573195 - 3573872 | 25363.7 |
| two-component sensor kinase | SAMEA3472147_03437 | Not Available | Negative | 3573869 - 3576553 | 98666.1 |
| potassium-transporting atpase subunit c | SAMEA3472147_03438 | Not Available | Negative | 3576546 - 3577118 | 20402.5 |
| potassium-transporting atpase b chain | SAMEA3472147_03439 | Not Available | Negative | 3577127 - 3579175 | 72270.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





