Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminobenzoyl-glutamate utilization protein b | SAMEA3472147_03419 | Not Available | Positive | 3552663 - 3554108 | 52168.4 |
| asparagine synthetase b | SAMEA3472147_03421 | Not Available | Negative | 3555348 - 3557012 | 62678.3 |
| n-acetylglucosamine metabolism nagd protein | SAMEA3472147_03422 | Not Available | Negative | 3557409 - 3558161 | 27164.6 |
| n-acetylglucosamine repressor | SAMEA3472147_03423 | Not Available | Negative | 3558209 - 3559429 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMEA3472147_03424 | Not Available | Negative | 3559438 - 3560586 | 40950.6 |
| glucosamine-6-phosphate isomerase | SAMEA3472147_03425 | Not Available | Negative | 3560646 - 3561446 | 29775.9 |
| n-acetylglucosamine-specific pts system eiicba components | SAMEA3472147_03426 | Not Available | Positive | 3561779 - 3563725 | 68335.9 |
| glutaminyl-trna synthetase | SAMEA3472147_03427 | Not Available | Positive | 3563928 - 3565592 | 63481.3 |
| outer membrane protein ybfm | SAMEA3472147_03428 | Not Available | Positive | 3566168 - 3567574 | 52748.8 |
| putative lipoprotein | SAMEA3472147_03429 | Not Available | Positive | 3567624 - 3567950 | 12017.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





