Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein n (porin) | SAMEA3472147_03407 | Not Available | Positive | 3542087 - 3543220 | 41207.9 |
| putative universal stress protein | SAMEA3472147_03408 | Not Available | Positive | 3543361 - 3543795 | 15959.4 |
| c32 trna thiolase | SAMEA3472147_03409 | Not Available | Positive | 3543971 - 3544906 | 35461.8 |
| atp-independent rna helicase | SAMEA3472147_03410 | Not Available | Negative | 3545035 - 3546408 | 49186.6 |
| uncharacterised protein | SAMEA3472147_03411 | Not Available | Negative | 3546438 - 3546611 | 6427.87 |
| zinc transport protein | SAMEA3472147_03413 | Not Available | Negative | 3546886 - 3547869 | 36614.3 |
| sensory box-containing diguanylate cyclase | SAMEA3472147_03414 | Not Available | Positive | 3548124 - 3548732 | 23111.9 |
| putative signaling protein | SAMEA3472147_03415 | Not Available | Positive | 3548729 - 3549355 | 23456.1 |
| smr domain protein | SAMEA3472147_03416 | Not Available | Negative | 3549376 - 3549939 | 21499.7 |
| aminobenzoyl-glutamate utilization protein a | SAMEA3472147_03418 | Not Available | Positive | 3551353 - 3552663 | 46604.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





