Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative enzyme ynbd | SAMEA3472147_03376 | Not Available | Negative | 3505707 - 3507023 | 50578.7 |
| putative hydrolase | SAMEA3472147_03377 | Not Available | Negative | 3507013 - 3508770 | 65589.5 |
| membrane associated ctp-phosphosubstrate transferase | SAMEA3472147_03378 | Not Available | Negative | 3508786 - 3509682 | 33346.0 |
| phosphatidylglycerophosphate synthase | SAMEA3472147_03379 | Not Available | Negative | 3509682 - 3510287 | 22614.6 |
| protein involved in detoxification of methylglyoxal | SAMEA3472147_03380 | Not Available | Negative | 3510457 - 3512763 | 86560.1 |
| putative oxidoreductase | SAMEA3472147_03381 | Not Available | Negative | 3512827 - 3513687 | 30740.9 |
| phenylacetic acid degradation protein | SAMEA3472147_03382 | Not Available | Negative | 3513919 - 3514509 | 21389.8 |
| dna-binding transcriptional repressor of phenylacetic acid degradation, aryl-coa responsive | SAMEA3472147_03383 | Not Available | Negative | 3514491 - 3515441 | 35298.7 |
| phenylacetyl-coa ligase | SAMEA3472147_03384 | Not Available | Negative | 3515542 - 3516855 | 48939.8 |
| beta-ketoadipyl coa thiolase | SAMEA3472147_03385 | Not Available | Negative | 3516882 - 3518087 | 42272.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





