Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transport protein | SAMEA3472147_03365 | Not Available | Negative | 3491124 - 3492368 | 43514.4 |
| putative ph-induced membrane-bound redox modulator | SAMEA3472147_03366 | Not Available | Negative | 3492767 - 3493732 | 35953.1 |
| putative oxidoreductase | SAMEA3472147_03368 | Not Available | Negative | 3494016 - 3495002 | 36217.2 |
| thioredoxin-like protein | SAMEA3472147_03369 | Not Available | Negative | 3495081 - 3495773 | 25587.5 |
| metal dependent hydrolase | SAMEA3472147_03370 | Not Available | Negative | 3495850 - 3496353 | 19456.6 |
| putative enzyme | SAMEA3472147_03371 | Not Available | Positive | 3496438 - 3497574 | 42284.7 |
| putative dna-binding protein | SAMEA3472147_03372 | Not Available | Positive | 3497845 - 3498261 | 14996.3 |
| 2,4-dienoyl-coa reductase | SAMEA3472147_03373 | Not Available | Negative | 3498306 - 3500324 | 72651.5 |
| atp-dependent helicase hrpa | SAMEA3472147_03374 | Not Available | Negative | 3500945 - 3504847 | 149004.0 |
| fmn-dependent nadh-azoreductase | SAMEA3472147_03375 | Not Available | Positive | 3505048 - 3505653 | 21672.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





