Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system n-acetylgalactosamine-specific transporter subunit iib | SAMEA3472147_03324 | Not Available | Negative | 3451854 - 3452327 | 17056.8 |
| putative tagatose 6-phosphate kinase | SAMEA3472147_03325 | Not Available | Negative | 3452350 - 3453630 | 47208.1 |
| agar family transcriptional regulator | SAMEA3472147_03326 | Not Available | Positive | 3453879 - 3454688 | 29574.3 |
| toxin of the sohb(prlf)-yhav toxin-antitoxin system | SAMEA3472147_03327 | Not Available | Negative | 3454743 - 3455045 | 11709.8 |
| toxin of the sohb(prlf)-yhav toxin-antitoxin system | SAMEA3472147_03328 | Not Available | Negative | 3455085 - 3455207 | 4647.38 |
| htra suppressor protein | SAMEA3472147_03329 | Not Available | Negative | 3455207 - 3455611 | 15105.1 |
| galactarate dehydratase | SAMEA3472147_03330 | Not Available | Negative | 3455690 - 3457261 | 56345.8 |
| galactarate transporter | SAMEA3472147_03331 | Not Available | Positive | 3457636 - 3458970 | 49012.0 |
| 2-dehydro-3-deoxyglucarate aldolase | SAMEA3472147_03332 | Not Available | Positive | 3458986 - 3459756 | 27400.6 |
| tartronate semialdehyde reductase | SAMEA3472147_03333 | Not Available | Positive | 3459786 - 3460676 | 30661.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





