Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine dehydratase 2 | SAMEA3472147_03314 | Not Available | Positive | 3441114 - 3442481 | 48724.9 |
| 5'-3' exonuclease | SAMEA3472147_03315 | Not Available | Positive | 3442503 - 3443348 | 31456.9 |
| lactaldehyde reductase (propanediol oxidoreductase) | SAMEA3472147_03316 | Not Available | Negative | 3443403 - 3444551 | 40549.7 |
| l-fuculose phosphate aldolase | SAMEA3472147_03317 | Not Available | Negative | 3444579 - 3445226 | 23786.7 |
| tagatose-1,6-bisphosphate aldolase | SAMEA3472147_03318 | Not Available | Negative | 3446236 - 3447096 | 31295.4 |
| putative tagatose-6-phosphate ketose/aldose isomerase | SAMEA3472147_03319 | Not Available | Negative | 3447109 - 3448263 | 41803.9 |
| n-acetylglucosamine-6-phosphate deacetylase (glcnac 6-p deacetylase) | SAMEA3472147_03320 | Not Available | Negative | 3448614 - 3449747 | 40282.8 |
| n-acetylgalactosamine-specific pts system eiia component 2 | SAMEA3472147_03321 | Not Available | Negative | 3449744 - 3450178 | 15513.7 |
| pts system n-acetylgalactosamine-specific transporter subunit iid | SAMEA3472147_03322 | Not Available | Negative | 3450196 - 3451074 | 31786.6 |
| n-acetylgalactosamine-specific enzyme iic component of pts | SAMEA3472147_03323 | Not Available | Negative | 3451064 - 3451843 | 27350.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





