Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | SAMEA3472147_03262 | Not Available | Negative | 3378728 - 3379231 | 18576.4 |
| inner membrane protein | SAMEA3472147_03263 | Not Available | Positive | 3379424 - 3380620 | 44848.0 |
| valyl-trna synthetase | SAMEA3472147_03264 | Not Available | Negative | 3380676 - 3383531 | 108170.0 |
| dna polymerase iii subunit chi | SAMEA3472147_03265 | Not Available | Negative | 3383531 - 3383974 | 16574.5 |
| cytosol aminopeptidase | SAMEA3472147_03266 | Not Available | Negative | 3384328 - 3385839 | 54830.0 |
| putative permease | SAMEA3472147_03267 | Not Available | Positive | 3386106 - 3387206 | 40360.1 |
| putative permease | SAMEA3472147_03268 | Not Available | Positive | 3387206 - 3388288 | 39621.0 |
| atpase | SAMEA3472147_03269 | Not Available | Negative | 3388449 - 3389951 | 54299.5 |
| Trna-leu | Not Available | Not Available | Positive | 3390442 - 3390526 | Not Available |
| phage integrase | SAMEA3472147_03271 | Not Available | Positive | 3390706 - 3390927 | 8549.59 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





