Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease l-psp | SAMEA3472147_03252 | Not Available | Negative | 3370466 - 3370852 | 13612.3 |
| aspartate carbamoyltransferase regulatory subunit | SAMEA3472147_03253 | Not Available | Negative | 3370925 - 3371386 | 17121.6 |
| aspartate carbamoyltransferase | SAMEA3472147_03254 | Not Available | Negative | 3371399 - 3372334 | 34429.3 |
| putative endoribonuclease | SAMEA3472147_03255 | Not Available | Negative | 3372752 - 3373147 | 14577.1 |
| putative short chain dehydrogenase | SAMEA3472147_03256 | Not Available | Negative | 3373278 - 3373991 | 24620.6 |
| tetr family transcriptional regulator | SAMEA3472147_03257 | Not Available | Positive | 3374062 - 3374655 | 21385.6 |
| toxin-antitoxin biofilm protein | SAMEA3472147_03258 | Not Available | Positive | 3374800 - 3375252 | 16924.4 |
| protein | SAMEA3472147_03259 | Not Available | Positive | 3375375 - 3377027 | 63860.3 |
| ornithine carbamoyltransferase 1 | SAMEA3472147_03260 | Not Available | Negative | 3377100 - 3378104 | 36879.2 |
| rnase e inhibitor protein | SAMEA3472147_03261 | Not Available | Positive | 3378266 - 3378682 | 15603.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





