Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472147_05027 | Not Available | Positive | 5095348 - 5095584 | 8484.79 |
| putative prophage protein | SAMEA3472147_05028 | Not Available | Positive | 5095586 - 5095714 | 4715.32 |
| putative prophage protein | SAMEA3472147_05029 | Not Available | Positive | 5095744 - 5095845 | 4008.79 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 22 - 136 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 75 - 2982 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 240 - 354 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 267 - 381 | Not Available |
| multidrug resistance protein y | SAMEA3472147_00001 | Not Available | Negative | 151 - 357 | 7627.67 |
| multidrug resistance protein y | SAMEA3472147_00002 | Not Available | Negative | 410 - 712 | 10556.0 |
| emrky-tolc multidrug resistance efflux pump, membrane fusion protein component | SAMEA3472147_00003 | Not Available | Negative | 712 - 1875 | 42631.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





