Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha helix protein | SAMEA3472147_03241 | Not Available | Negative | 3356809 - 3357360 | 21360.5 |
| putative modulator of dna gyrase | SAMEA3472147_03242 | Not Available | Positive | 3357454 - 3358806 | 48430.4 |
| soluble cytochrome b562 | SAMEA3472147_03243 | Not Available | Positive | 3358990 - 3359376 | 14063.7 |
| bifunctional antitoxin/transcriptional repressor relb | SAMEA3472147_03244 | Not Available | Positive | 3359567 - 3359806 | 9042.95 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMEA3472147_03245 | Not Available | Negative | 3359807 - 3360271 | 17456.9 |
| anaerobic ribonucleoside-triphosphate reductase | SAMEA3472147_03246 | Not Available | Negative | 3360461 - 3362599 | 80027.0 |
| trehalose-6-phosphate hydrolase | SAMEA3472147_03247 | Not Available | Negative | 3362993 - 3364648 | 63921.1 |
| trehalose-specific pts system eiibc component | SAMEA3472147_03248 | Not Available | Negative | 3364698 - 3366119 | 51105.0 |
| trehalose operon repressor | SAMEA3472147_03249 | Not Available | Negative | 3366238 - 3367185 | 34575.8 |
| mg(2+) transport atpase, p-type | SAMEA3472147_03251 | Not Available | Positive | 3367564 - 3370260 | 99442.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





