Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472147_03220 | Not Available | Positive | 3335355 - 3335582 | 8626.63 |
| uncharacterised protein | SAMEA3472147_03221 | Not Available | Positive | 3335757 - 3335978 | 8087.7 |
| cysq protein | SAMEA3472147_03222 | Not Available | Positive | 3336268 - 3337008 | 27191.4 |
| uncharacterised protein | SAMEA3472147_03223 | Not Available | Positive | 3337220 - 3338113 | 34356.8 |
| protein ytfj | SAMEA3472147_03224 | Not Available | Negative | 3338221 - 3338775 | 20495.7 |
| conserved protein, duf1107 family | SAMEA3472147_03225 | Not Available | Positive | 3339100 - 3339306 | 8072.24 |
| putative transporter | SAMEA3472147_03226 | Not Available | Negative | 3339368 - 3340711 | 49765.6 |
| methionine sulfoxide reductase a | SAMEA3472147_03228 | Not Available | Negative | 3341033 - 3341671 | 23341.3 |
| putative outer membrane protein assembly factor | SAMEA3472147_03229 | Not Available | Positive | 3341877 - 3343610 | 64799.7 |
| translocation and assembly module for autotransporter export, inner membrane subunit | SAMEA3472147_03230 | Not Available | Positive | 3343607 - 3347386 | 136723.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





