Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMEA3472147_03210 | Not Available | Positive | 3329977 - 3330525 | 20701.7 |
| Trna-gly | Not Available | Not Available | Positive | 3330677 - 3330752 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3330806 - 3330879 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3330892 - 3330978 | Not Available |
| uncharacterised protein | SAMEA3472147_03214 | Not Available | Negative | 3331221 - 3331961 | 28249.2 |
| integrase | SAMEA3472147_03215 | Not Available | Positive | 3332042 - 3333259 | 46130.3 |
| uncharacterised protein | SAMEA3472147_03216 | Not Available | Positive | 3333275 - 3333526 | 9450.39 |
| uncharacterised protein | SAMEA3472147_03217 | Not Available | Positive | 3333620 - 3333991 | 14144.0 |
| uncharacterised protein | SAMEA3472147_03218 | Not Available | Positive | 3334017 - 3334550 | 19492.2 |
| protein of uncharacterised function (duf2787) | SAMEA3472147_03219 | Not Available | Positive | 3334623 - 3335057 | 17020.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





