Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flil | SAMEA3472147_03180 | Not Available | Negative | 3302492 - 3302956 | 17221.8 |
| flagellar hook-length control protein | SAMEA3472147_03181 | Not Available | Negative | 3303061 - 3304188 | 39302.9 |
| flagellar protein flij | SAMEA3472147_03182 | Not Available | Negative | 3304185 - 3304628 | 17325.6 |
| flagellum-specific atp synthase | SAMEA3472147_03183 | Not Available | Negative | 3304647 - 3306020 | 49318.6 |
| flagellar assembly protein h | SAMEA3472147_03184 | Not Available | Negative | 3306020 - 3306706 | 25081.7 |
| flagellar motor switch protein flig | SAMEA3472147_03185 | Not Available | Negative | 3306699 - 3307694 | 36778.2 |
| flagellar m-ring protein | SAMEA3472147_03186 | Not Available | Negative | 3307687 - 3309345 | 60605.6 |
| flagellar hook-basal body complex protein flie | SAMEA3472147_03187 | Not Available | Positive | 3309560 - 3309874 | 11139.5 |
| non-lee-encoded type iii effector | SAMEA3472147_03188 | Not Available | Positive | 3310223 - 3311362 | 43112.8 |
| gcn5-related n-acetyltransferase | SAMEA3472147_03189 | Not Available | Negative | 3311500 - 3311979 | 18044.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





