Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative minor tail protein | SAMEA3472147_04993 | Not Available | Positive | 5065251 - 5065568 | 12306.8 |
| Phage minor tail protein l | SAMEA3472147_04994 | Not Available | Positive | 5065580 - 5066278 | 25756.4 |
| Putative tail fiber component | SAMEA3472147_04995 | Not Available | Positive | 5066289 - 5067032 | 28240.5 |
| Hypothetical protein | SAMEA3472147_05020 | Not Available | Negative | 5090903 - 5091616 | 26241.4 |
| Replication protein 14 | SAMEA3472147_05021 | Not Available | Negative | 5091650 - 5092315 | 25419.4 |
| Putative cii repressor | SAMEA3472147_05022 | Not Available | Negative | 5093368 - 5093793 | 16045.3 |
| Putative transcriptional regulator | SAMEA3472147_05023 | Not Available | Negative | 5093777 - 5094052 | 9992.78 |
| Putative repressor protein | SAMEA3472147_05024 | Not Available | Positive | 5094160 - 5094660 | 19028.9 |
| uncharacterised protein | SAMEA3472147_05025 | Not Available | Positive | 5094678 - 5094869 | 7004.16 |
| putative plasmid stabilization-like protein from prophage | SAMEA3472147_05026 | Not Available | Positive | 5094869 - 5095159 | 11176.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





