Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase b | SAMEA3472147_03136 | Not Available | Positive | 3266241 - 3267194 | 35221.2 |
| molybdopterin biosynthesis mog protein | SAMEA3472147_03137 | Not Available | Positive | 3267309 - 3267896 | 21223.6 |
| putative membrane protein yaah | SAMEA3472147_03138 | Not Available | Negative | 3267931 - 3268497 | 20058.1 |
| putative oxidoreductase | SAMEA3472147_03139 | Not Available | Negative | 3268646 - 3269359 | 26666.5 |
| protein | SAMEA3472147_03140 | Not Available | Negative | 3269385 - 3269789 | 14524.5 |
| chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70) | SAMEA3472147_03141 | Not Available | Positive | 3270166 - 3272082 | 69118.9 |
| chaperone protein dnaj | SAMEA3472147_03143 | Not Available | Positive | 3272171 - 3273301 | 41016.7 |
| na(+)/h(+) antiporter 1 | SAMEA3472147_03145 | Not Available | Positive | 3274143 - 3275309 | 41376.3 |
| transcriptional activator nhar | SAMEA3472147_03146 | Not Available | Positive | 3275375 - 3276274 | 34068.1 |
| ybl1 | SAMEA3472147_03147 | Not Available | Negative | 3276312 - 3276737 | 16133.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





