Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aldo/keto reductase | SAMEA3472147_03115 | Not Available | Negative | 3243248 - 3243907 | 24415.2 |
| putative hth-type transcriptional regulator alsr | SAMEA3472147_03116 | Not Available | Positive | 3244041 - 3244928 | 33046.5 |
| putative abc transporter atp-binding protein yjjk | SAMEA3472147_03117 | Not Available | Negative | 3245082 - 3246749 | 62446.5 |
| murein transglycosylase | SAMEA3472147_03118 | Not Available | Positive | 3247085 - 3249022 | 73356.2 |
| trp operon repressor | SAMEA3472147_03119 | Not Available | Positive | 3249142 - 3249438 | 11319.7 |
| ntpase | SAMEA3472147_03120 | Not Available | Negative | 3249585 - 3250097 | 18242.7 |
| phosphoglycerate mutase | SAMEA3472147_03121 | Not Available | Positive | 3250149 - 3250796 | 24066.7 |
| right origin-binding protein | SAMEA3472147_03122 | Not Available | Negative | 3250793 - 3251662 | 33146.8 |
| crea protein | SAMEA3472147_03123 | Not Available | Positive | 3251873 - 3252346 | 17108.8 |
| two-component response regulator | SAMEA3472147_03124 | Not Available | Positive | 3252359 - 3253048 | 26142.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





