Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | SAMEA3472147_03105 | Not Available | Negative | 3235061 - 3235324 | 10042.5 |
| lipoate-protein ligase a | SAMEA3472147_03106 | Not Available | Negative | 3235356 - 3236372 | 37846.8 |
| smp protein precursor | SAMEA3472147_03107 | Not Available | Negative | 3236400 - 3237044 | 24084.2 |
| phosphoserine phosphatase serb | SAMEA3472147_03108 | Not Available | Positive | 3237150 - 3238118 | 35044.8 |
| dna repair protein rada | SAMEA3472147_03109 | Not Available | Positive | 3238167 - 3239549 | 49445.0 |
| transcriptional regulator | SAMEA3472147_03110 | Not Available | Positive | 3239570 - 3240802 | 47251.3 |
| protein of uncharacterised function (duf1471) | SAMEA3472147_03111 | Not Available | Negative | 3241269 - 3241481 | 7355.82 |
| polyketide cyclase / dehydrase and lipid transport | SAMEA3472147_03112 | Not Available | Negative | 3241639 - 3242055 | 15237.9 |
| putative 3-oxoacyl-[acyl-carrier-protein] reductase | SAMEA3472147_03113 | Not Available | Negative | 3242081 - 3242878 | 27073.3 |
| putative aldo/keto reductase | SAMEA3472147_03114 | Not Available | Negative | 3242898 - 3243248 | 12223.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





