Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | SAMEA3472147_03085 | Not Available | Positive | 3217209 - 3217298 | 3373.05 |
| fidl-like protein | SAMEA3472147_03086 | Not Available | Positive | 3217291 - 3217773 | 18707.4 |
| small stress response protein | SAMEA3472147_03087 | Not Available | Negative | 3217806 - 3217946 | 5646.07 |
| uncharacterised protein | SAMEA3472147_03088 | Not Available | Negative | 3217922 - 3218347 | 16243.5 |
| uncharacterised protein | SAMEA3472147_03089 | Not Available | Positive | 3218526 - 3218621 | 3612.43 |
| uncharacterised protein | SAMEA3472147_03090 | Not Available | Positive | 3218777 - 3219268 | 18434.4 |
| type iii secretion-associated chaperone | SAMEA3472147_03091 | Not Available | Positive | 3219494 - 3219985 | 19048.2 |
| putative invasion genes regulator | SAMEA3472147_03092 | Not Available | Positive | 3220319 - 3221479 | 44065.0 |
| putative phage tail fiber protein | SAMEA3472147_03093 | Not Available | Positive | 3221809 - 3222108 | 10976.0 |
| peptide chain release factor 3 | SAMEA3472147_03094 | Not Available | Positive | 3222919 - 3224505 | 59289.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





