Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3472147_03075 | Not Available | Positive | 3207019 - 3207954 | 34424.7 |
| putative asp/glu/hydantoin racemase | SAMEA3472147_03076 | Not Available | Negative | 3207941 - 3208633 | 25295.5 |
| arabinose-proton symporter | SAMEA3472147_03077 | Not Available | Negative | 3208752 - 3210170 | 51687.6 |
| 2-keto-3-deoxygluconate oxidoreductase | SAMEA3472147_03078 | Not Available | Negative | 3210485 - 3211246 | 27056.7 |
| 5-keto-4-deoxyuronate isomerase | SAMEA3472147_03079 | Not Available | Negative | 3211276 - 3212112 | 31032.1 |
| putative acyltransferase | SAMEA3472147_03080 | Not Available | Negative | 3212399 - 3213580 | 41021.2 |
| membrane protein | SAMEA3472147_03081 | Not Available | Positive | 3213835 - 3215064 | 45096.9 |
| bipartite regulator domain | SAMEA3472147_03082 | Not Available | Positive | 3215524 - 3216156 | 24387.3 |
| uncharacterised protein | SAMEA3472147_03083 | Not Available | Negative | 3216238 - 3216369 | 5231.47 |
| putative transcriptional regulator | SAMEA3472147_03084 | Not Available | Positive | 3216490 - 3217212 | 27463.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





