Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative major capsid protein | SAMEA3472147_04732 | Not Available | Positive | 4812329 - 4813543 | 44907.6 |
| Hypothetical protein | SAMEA3472147_04733 | Not Available | Positive | 4813598 - 4813987 | 13533.2 |
| Hypothetical protein | SAMEA3472147_04734 | Not Available | Positive | 4814037 - 4814498 | 17336.5 |
| Hypothetical protein | SAMEA3472147_04735 | Not Available | Positive | 4814482 - 4815045 | 21147.2 |
| Hypothetical protein | SAMEA3472147_04736 | Not Available | Positive | 4815045 - 4815695 | 23678.4 |
| Tail component | SAMEA3472147_04988 | Not Available | Positive | 5061094 - 5061351 | 9164.3 |
| Major tail protein v | SAMEA3472147_04989 | Not Available | Positive | 5061379 - 5061843 | 15963.0 |
| Tail component | SAMEA3472147_04990 | Not Available | Positive | 5061859 - 5062290 | 15544.2 |
| Tail component | SAMEA3472147_04991 | Not Available | Positive | 5062317 - 5062721 | 15107.8 |
| Tail component | SAMEA3472147_04992 | Not Available | Positive | 5062711 - 5065254 | 91614.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





