Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase | SAMEA3472147_03012 | Not Available | Negative | 3139026 - 3140621 | 57405.0 |
| alkyl hydroperoxide reductase subunit c | SAMEA3472147_03013 | Not Available | Negative | 3140720 - 3141283 | 20762.5 |
| disulfide isomerase/thiol-disulfide oxidase | SAMEA3472147_03014 | Not Available | Positive | 3141655 - 3142401 | 27463.5 |
| dna-binding transcriptional regulator, lysr-type | SAMEA3472147_03015 | Not Available | Positive | 3142610 - 3143512 | 34378.8 |
| immunoglobulin-binding regulator | SAMEA3472147_03016 | Not Available | Positive | 3143659 - 3144879 | 47912.3 |
| parb-like nuclease | SAMEA3472147_03017 | Not Available | Positive | 3144864 - 3145481 | 23508.2 |
| aminotransferase | SAMEA3472147_03018 | Not Available | Negative | 3145482 - 3146642 | 42982.3 |
| iron-containing alcohol dehydrogenase | SAMEA3472147_03019 | Not Available | Positive | 3146751 - 3147839 | 39067.7 |
| conserved protein, duf466 family | SAMEA3472147_03020 | Not Available | Negative | 3147849 - 3148046 | 7467.89 |
| carbon starvation protein a | SAMEA3472147_03021 | Not Available | Negative | 3148228 - 3150333 | 75021.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





