Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472147_02960 | Not Available | Positive | 3090188 - 3091057 | 32953.8 |
| putative lipoprotein | SAMEA3472147_02961 | Not Available | Negative | 3091107 - 3091460 | 11959.2 |
| chaperonin cpn60 | SAMEA3472147_02962 | Not Available | Negative | 3091598 - 3093253 | 57577.7 |
| 10 kda chaperonin (protein cpn10) (groes protein) | SAMEA3472147_02963 | Not Available | Negative | 3093297 - 3093590 | 10387.6 |
| inner membrane protein yjeh | SAMEA3472147_02964 | Not Available | Positive | 3093866 - 3095122 | 44772.2 |
| protein fxsa (suppressor of f exclusion of phage t7) | SAMEA3472147_02965 | Not Available | Negative | 3095138 - 3095614 | 17679.1 |
| aspartate ammonia-lyase | SAMEA3472147_02966 | Not Available | Positive | 3095951 - 3097387 | 52359.2 |
| anaerobic c4-dicarboxylate transporter | SAMEA3472147_02967 | Not Available | Positive | 3097505 - 3098806 | 45753.5 |
| divalent cation tolerance protein | SAMEA3472147_02968 | Not Available | Positive | 3098922 - 3099260 | 12331.7 |
| thiol:disulfide interchange protein | SAMEA3472147_02969 | Not Available | Positive | 3099236 - 3100933 | 61850.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





