Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase iron-sulfur subunit | SAMEA3472147_02949 | Not Available | Positive | 3084065 - 3084799 | 27124.5 |
| fumarate reductase subunit c | SAMEA3472147_02950 | Not Available | Positive | 3084810 - 3085205 | 15015.8 |
| fumarate reductase subunit d | SAMEA3472147_02951 | Not Available | Positive | 3085216 - 3085575 | 13107.8 |
| beta-lactamase | SAMEA3472147_02952 | Not Available | Positive | 3085767 - 3086771 | 36949.2 |
| outer membrane lipoprotein | SAMEA3472147_02953 | Not Available | Positive | 3086860 - 3087393 | 19924.7 |
| quaternary ammonium compound-resistance protein | SAMEA3472147_02954 | Not Available | Negative | 3087390 - 3087707 | 10901.0 |
| entericidin b | SAMEA3472147_02956 | Not Available | Negative | 3087883 - 3088029 | 4809.81 |
| entericidin a | SAMEA3472147_02957 | Not Available | Negative | 3088140 - 3088265 | 4359.48 |
| elongation factor p (ef-p) | SAMEA3472147_02958 | Not Available | Negative | 3088317 - 3088883 | 20592.4 |
| radical sam superfamily protein | SAMEA3472147_02959 | Not Available | Positive | 3088925 - 3089953 | 38682.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





