Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 3072298 - 3072373 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3072410 - 3072485 | Not Available |
| oligoribonuclease | SAMEA3472147_02941 | Not Available | Negative | 3072696 - 3073241 | 20816.8 |
| ribosome-associated gtpase | SAMEA3472147_02942 | Not Available | Positive | 3073336 - 3074388 | 39239.6 |
| phosphatidylserine decarboxylase proenzyme | SAMEA3472147_02943 | Not Available | Positive | 3074485 - 3075453 | 35937.4 |
| mechanosensitive ion channel family protein | SAMEA3472147_02944 | Not Available | Positive | 3075475 - 3078798 | 124015.0 |
| inner membrane protein | SAMEA3472147_02945 | Not Available | Negative | 3078829 - 3079131 | 12119.0 |
| transporter | SAMEA3472147_02946 | Not Available | Negative | 3079241 - 3080698 | 53138.0 |
| lysyl-trna synthetase | SAMEA3472147_02947 | Not Available | Negative | 3080962 - 3081939 | 36978.1 |
| fumarate reductase flavoprotein subunit | SAMEA3472147_02948 | Not Available | Positive | 3082264 - 3084072 | 66023.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





