Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472147_04722 | Not Available | Positive | 4803357 - 4803626 | 9332.92 |
| Holin protein | SAMEA3472147_04723 | Not Available | Positive | 4803702 - 4803917 | 8026.76 |
| Lysozyme | SAMEA3472147_04724 | Not Available | Positive | 4803922 - 4804455 | 19593.5 |
| putative transmembrane protein | SAMEA3472147_04725 | Not Available | Positive | 4804677 - 4804790 | 4139.18 |
| Outer membrane lytic protein rz | SAMEA3472147_04726 | Not Available | Positive | 4804735 - 4805229 | 18136.8 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase | SAMEA3472147_04727 | Not Available | Negative | 4805310 - 4805891 | 22119.9 |
| Small subunit terminase | SAMEA3472147_04728 | Not Available | Positive | 4806494 - 4807309 | 30673.1 |
| Hypothetical protein | SAMEA3472147_04729 | Not Available | Positive | 4807290 - 4808996 | 65288.6 |
| Portal protein | SAMEA3472147_04730 | Not Available | Positive | 4808996 - 4811140 | 81111.1 |
| Hypothetical protein | SAMEA3472147_04731 | Not Available | Positive | 4811298 - 4812305 | 36753.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





