Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system l-ascorbate-specific transporter subunit iib | SAMEA3472147_02909 | Not Available | Negative | 3043242 - 3043547 | 10896.3 |
| pts system ascorbate-specific transporter subunit iic | SAMEA3472147_02910 | Not Available | Negative | 3043563 - 3044960 | 50758.6 |
| l-ascorbate 6-phosphate lactonase | SAMEA3472147_02911 | Not Available | Positive | 3045315 - 3046379 | 40062.7 |
| deor-family transcriptional regulator | SAMEA3472147_02912 | Not Available | Positive | 3046487 - 3047242 | 27603.6 |
| putative esterase | SAMEA3472147_02913 | Not Available | Negative | 3047239 - 3047988 | 27549.9 |
| putative lipoprotein | SAMEA3472147_02914 | Not Available | Positive | 3048170 - 3048499 | 12038.7 |
| protein | SAMEA3472147_02915 | Not Available | Positive | 3048648 - 3048923 | 9949.64 |
| isovaleryl coa dehydrogenase | SAMEA3472147_02916 | Not Available | Negative | 3049040 - 3050665 | 60598.4 |
| glutathionylspermidine synthase yjfc | SAMEA3472147_02917 | Not Available | Negative | 3050749 - 3051912 | 45036.0 |
| putative membrane protein yjfm | SAMEA3472147_02918 | Not Available | Negative | 3051915 - 3052553 | 23404.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





