Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472147_02889 | Not Available | Negative | 3024556 - 3024729 | 6226.1 |
| glutathione reductase | SAMEA3472147_02890 | Not Available | Negative | 3024894 - 3026246 | 48755.3 |
| dna (exogenous) processing protein | SAMEA3472147_02891 | Not Available | Negative | 3026318 - 3027160 | 31988.5 |
| oligopeptidase a | SAMEA3472147_02892 | Not Available | Positive | 3027363 - 3029405 | 77171.3 |
| methyltransferase | SAMEA3472147_02893 | Not Available | Positive | 3029411 - 3030163 | 26950.8 |
| putative oligopeptide transporter | SAMEA3472147_02894 | Not Available | Negative | 3030212 - 3031681 | 53578.4 |
| universal stress protein a | SAMEA3472147_02895 | Not Available | Negative | 3031998 - 3032432 | 16067.3 |
| universal stress protein b | SAMEA3472147_02896 | Not Available | Positive | 3032823 - 3033158 | 13028.1 |
| low-affinity inorganic phosphate transporter | SAMEA3472147_02897 | Not Available | Negative | 3033229 - 3034728 | 53392.4 |
| oxidoreductase with fad/nad(p)-binding domain | SAMEA3472147_02898 | Not Available | Positive | 3034960 - 3036162 | 43665.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





