Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shux-like protein | SAMEA3472147_02879 | Not Available | Negative | 3013870 - 3014364 | 18356.9 |
| putative oxygen independent coproporphyrinogen iii oxidase | SAMEA3472147_02880 | Not Available | Negative | 3014377 - 3015714 | 49576.2 |
| periplasmic binding protein | SAMEA3472147_02881 | Not Available | Negative | 3015734 - 3016648 | 32777.9 |
| hemin tonb-dependent receptor | SAMEA3472147_02882 | Not Available | Positive | 3017330 - 3019312 | 72618.1 |
| putative hemin-degrading protein | SAMEA3472147_02883 | Not Available | Positive | 3019361 - 3019765 | 15509.7 |
| putative hemin-degrading protein | SAMEA3472147_02884 | Not Available | Positive | 3019792 - 3020388 | 22131.4 |
| transcriptional regulator | SAMEA3472147_02885 | Not Available | Negative | 3020449 - 3020979 | 20452.5 |
| slp family outer membrane lipoprotein | SAMEA3472147_02886 | Not Available | Negative | 3021135 - 3021701 | 20949.1 |
| yhis | SAMEA3472147_02887 | Not Available | Negative | 3021948 - 3023171 | 47349.1 |
| arsenate reductase | SAMEA3472147_02888 | Not Available | Negative | 3023798 - 3024223 | 15860.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





