Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_02735 | SAMEA3472147_02858 | Not Available | Negative | 2992265 - 2993278 | Not Available |
| lysr family transcriptional regulator | SAMEA3472147_02859 | Not Available | Negative | 2993327 - 2994298 | 36093.0 |
| transcriptional regulator | SAMEA3472147_02860 | Not Available | Positive | 2994746 - 2995348 | 22605.6 |
| cytoplasmic trehalase | SAMEA3472147_02861 | Not Available | Negative | 2995399 - 2997048 | 63700.1 |
| putative cytochrome c peroxidase | SAMEA3472147_02862 | Not Available | Positive | 2997453 - 2998850 | 51557.3 |
| glutamate decarboxylase beta | SAMEA3472147_02863 | Not Available | Positive | 2999061 - 3000461 | 52654.0 |
| arac family transcriptional regulator | SAMEA3472147_02864 | Not Available | Positive | 3000831 - 3001655 | 31511.3 |
| arac family transcriptional regulator | SAMEA3472147_02866 | Not Available | Positive | 3002023 - 3002751 | 28016.1 |
| uncharacterised protein | SAMEA3472147_02867 | Not Available | Positive | 3002896 - 3003177 | 10523.2 |
| multidrug resistance protein | SAMEA3472147_02868 | Not Available | Negative | 3003114 - 3006227 | 111553.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





