Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage accessory dna packaging protein | SAMEA3472147_04616 | Not Available | Positive | 4702779 - 4703162 | 13865.3 |
| Head-tail joining protein | SAMEA3472147_04617 | Not Available | Positive | 4703155 - 4703508 | 12623.7 |
| Tail component | SAMEA3472147_04618 | Not Available | Positive | 4703523 - 4704056 | 20172.1 |
| Tail component | SAMEA3472147_04619 | Not Available | Positive | 4704053 - 4704448 | 14894.4 |
| Major tail protein v | SAMEA3472147_04620 | Not Available | Positive | 4704456 - 4705208 | 26330.7 |
| Tail component | SAMEA3472147_04621 | Not Available | Positive | 4705222 - 4705653 | 15589.3 |
| Tail component | SAMEA3472147_04622 | Not Available | Positive | 4705680 - 4706093 | 15254.1 |
| Tail component | SAMEA3472147_04623 | Not Available | Positive | 4706074 - 4708635 | 92601.3 |
| Putative minor tail protein | SAMEA3472147_04624 | Not Available | Positive | 4708632 - 4708961 | 12584.2 |
| Hypothetical protein | SAMEA3472147_04721 | Not Available | Positive | 4803137 - 4803319 | 6854.44 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





