Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein trae | SAMEA3472147_02828 | Not Available | Negative | 2950778 - 2951599 | 31232.2 |
| minor pilin subunit | SAMEA3472147_02829 | Not Available | Negative | 2952072 - 2953433 | 48894.8 |
| flp pilus assembly protein, protease cpaa | SAMEA3472147_02830 | Not Available | Negative | 2953451 - 2954077 | 23211.1 |
| invasion protein iagb | SAMEA3472147_02831 | Not Available | Negative | 2954093 - 2954578 | 18413.4 |
| major pillin subunit | SAMEA3472147_02832 | Not Available | Negative | 2954623 - 2955159 | 19085.9 |
| type iv pilin biogenesis protein | SAMEA3472147_02833 | Not Available | Negative | 2955221 - 2956315 | 41099.8 |
| type ii traffic warden atpase | SAMEA3472147_02834 | Not Available | Negative | 2956317 - 2957825 | 55931.1 |
| type iv pilus biogenesis protein pilp | SAMEA3472147_02835 | Not Available | Negative | 2957929 - 2958387 | 16572.8 |
| pilin accessory protein (pilo) | SAMEA3472147_02836 | Not Available | Negative | 2958377 - 2959672 | 47989.1 |
| bundle-forming pilus b | SAMEA3472147_02837 | Not Available | Negative | 2959693 - 2961312 | 57537.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





