Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer integral membrane protein tray | SAMEA3472147_02808 | Not Available | Negative | 2928490 - 2930649 | 77012.3 |
| conjugal transfer protein trax | SAMEA3472147_02809 | Not Available | Negative | 2930724 - 2931293 | 22103.4 |
| conjugal transfer protein traw | SAMEA3472147_02810 | Not Available | Negative | 2931290 - 2932495 | 42959.2 |
| conjugal transfer protein trav | SAMEA3472147_02811 | Not Available | Negative | 2932453 - 2933073 | 23457.4 |
| type iv secretory pathway, virb4 components | SAMEA3472147_02812 | Not Available | Negative | 2933073 - 2936117 | 114180.0 |
| trat transfer protein | SAMEA3472147_02813 | Not Available | Negative | 2936412 - 2937038 | 23794.8 |
| tras transfer protein | SAMEA3472147_02814 | Not Available | Negative | 2937145 - 2937396 | 9118.84 |
| trar protein | SAMEA3472147_02815 | Not Available | Negative | 2937453 - 2937851 | 13733.8 |
| inci1 conjugal transfer protein traq | SAMEA3472147_02816 | Not Available | Negative | 2937898 - 2938428 | 18217.5 |
| trap | SAMEA3472147_02817 | Not Available | Negative | 2938425 - 2939138 | 26091.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





