Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472147_02776 | Not Available | Negative | 2898491 - 2898901 | 15479.7 |
| putative endonuclease/exonuclease/phosphatase | SAMEA3472147_02777 | Not Available | Positive | 2899034 - 2899795 | 28791.4 |
| putative phospholipase | SAMEA3472147_02778 | Not Available | Positive | 2899792 - 2901033 | 47664.2 |
| inner membrane protein | SAMEA3472147_02779 | Not Available | Positive | 2901033 - 2901989 | 35876.6 |
| arsr family transcriptional regulator | SAMEA3472147_02781 | Not Available | Positive | 2903603 - 2904181 | 21450.9 |
| tetracycline repressor protein tetr | SAMEA3472147_02782 | Not Available | Negative | 2904159 - 2904782 | 23356.0 |
| tetracycline resistance protein, class b (teta(b)) (metal-tetracycline/h(+) antiporter) | SAMEA3472147_02783 | Not Available | Positive | 2904864 - 2906069 | 43239.8 |
| transcriptional regulator | SAMEA3472147_02784 | Not Available | Negative | 2906182 - 2906775 | 22747.6 |
| operon control protein | SAMEA3472147_02785 | Not Available | Positive | 2906863 - 2907279 | 16775.3 |
| transposase, is4 family, is10 | SAMEA3472147_02786 | Not Available | Negative | 2907289 - 2907981 | 26284.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





