Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein | SAMEA3472147_02736 | Not Available | Negative | 2855240 - 2856832 | 59946.6 |
| site-specific invertase | SAMEA3472147_02737 | Not Available | Positive | 2856867 - 2858366 | 57373.5 |
| uncharacterised protein | SAMEA3472147_02738 | Not Available | Positive | 2858431 - 2858829 | 15949.5 |
| transcriptional regulator | SAMEA3472147_02739 | Not Available | Negative | 2858914 - 2859198 | 10585.7 |
| uncharacterised protein | SAMEA3472147_02740 | Not Available | Positive | 2859414 - 2859683 | 9795.8 |
| uncharacterised protein | SAMEA3472147_02741 | Not Available | Positive | 2859680 - 2859868 | 6798.88 |
| endonuclease | SAMEA3472147_02742 | Not Available | Positive | 2860078 - 2860818 | 28972.3 |
| site-specific recombinase | SAMEA3472147_02743 | Not Available | Negative | 2861494 - 2862135 | 24018.3 |
| methyltransferase | SAMEA3472147_02744 | Not Available | Positive | 2862360 - 2863676 | 50945.4 |
| uncharacterised protein | SAMEA3472147_02745 | Not Available | Negative | 2863758 - 2864654 | 33791.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





