Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472147_04606 | Not Available | Positive | 4693731 - 4693862 | 4584.99 |
| Putative endopeptidase | SAMEA3472147_04607 | Not Available | Positive | 4693870 - 4694337 | 17489.1 |
| uncharacterised protein | SAMEA3472147_04608 | Not Available | Positive | 4694688 - 4694828 | 5033.44 |
| Terminase small subunit nu1 | SAMEA3472147_04609 | Not Available | Positive | 4695535 - 4696083 | 20430.3 |
| Dna packaging protein | SAMEA3472147_04610 | Not Available | Positive | 4696055 - 4697983 | 72952.1 |
| Head-tail connector gpw | SAMEA3472147_04611 | Not Available | Positive | 4697967 - 4698173 | 7674.37 |
| Bacteriophage portal protein | SAMEA3472147_04612 | Not Available | Positive | 4698170 - 4699762 | 59696.6 |
| Bacteriophage prohead protease | SAMEA3472147_04613 | Not Available | Positive | 4699752 - 4701257 | 52332.9 |
| Bacteriophage head decoration protein | SAMEA3472147_04614 | Not Available | Positive | 4701294 - 4701641 | 11935.1 |
| Bacteriophage major capsid protein | SAMEA3472147_04615 | Not Available | Positive | 4701699 - 4702727 | 38459.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





