Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative binding protein ylib precursor | SAMEA3472147_02726 | Not Available | Negative | 2841846 - 2843384 | 56445.1 |
| glutathione transporter atp-binding protein | SAMEA3472147_02727 | Not Available | Negative | 2843404 - 2845275 | 69163.4 |
| putative l-asparaginase | SAMEA3472147_02728 | Not Available | Negative | 2845262 - 2846227 | 33531.1 |
| molybdopterin biosynthesis protein | SAMEA3472147_02729 | Not Available | Positive | 2846431 - 2847666 | 44078.8 |
| molybdopterin biosynthesis protein | SAMEA3472147_02730 | Not Available | Positive | 2847666 - 2848415 | 26644.3 |
| fructose-6-phosphate aldolase | SAMEA3472147_02731 | Not Available | Negative | 2848491 - 2849153 | 23028.3 |
| putative pyruvate formate-lyase 3-activating enzyme | SAMEA3472147_02732 | Not Available | Positive | 2849284 - 2850183 | 33109.0 |
| putative formate acetyltransferase 3 (pyruvate formate lyase 3) | SAMEA3472147_02733 | Not Available | Positive | 2850189 - 2852621 | 90100.6 |
| putative hydrolase | SAMEA3472147_02734 | Not Available | Positive | 2852767 - 2853582 | 30457.6 |
| protein | SAMEA3472147_02735 | Not Available | Positive | 2853734 - 2854999 | 47370.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





