Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein ydiu | SAMEA3472147_02706 | Not Available | Positive | 2818584 - 2820020 | 54448.2 |
| putative cytoplasmic protein | SAMEA3472147_02707 | Not Available | Negative | 2820024 - 2820215 | 7117.58 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3472147_02708 | Not Available | Negative | 2820347 - 2821393 | 38737.3 |
| pep synthetase regulatory protein | SAMEA3472147_02709 | Not Available | Negative | 2821550 - 2822383 | 31212.7 |
| phosphoenolpyruvate synthase | SAMEA3472147_02710 | Not Available | Positive | 2822716 - 2825094 | 87387.1 |
| short-chain-fatty-acid--coa ligase (acyl-coa synthetase) | SAMEA3472147_02711 | Not Available | Negative | 2825151 - 2826797 | 60782.5 |
| putative ferrodoxin | SAMEA3472147_02712 | Not Available | Negative | 2826854 - 2827147 | 10717.7 |
| putative flavoprotein | SAMEA3472147_02713 | Not Available | Negative | 2827144 - 2828433 | 45955.8 |
| putative electron transfer flavoprotein subunit alpha | SAMEA3472147_02714 | Not Available | Negative | 2828489 - 2829427 | 33775.6 |
| putative electron transfer flavoprotein beta subunit | SAMEA3472147_02715 | Not Available | Negative | 2829447 - 2830211 | 27445.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





