Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-lee-encoded type iii secreted effector | SAMEA3472147_02645 | Not Available | Negative | 2770489 - 2771904 | 52369.9 |
| putative ankyrin repeat regulatory protein | SAMEA3472147_02646 | Not Available | Negative | 2771928 - 2772386 | 17687.2 |
| threonine trna synthetase | SAMEA3472147_02647 | Not Available | Positive | 2772909 - 2774837 | 74018.4 |
| translation initiation factor if-3 | SAMEA3472147_02648 | Not Available | Positive | 2774949 - 2775383 | 16638.4 |
| 50s ribosomal subunit protein l35 | SAMEA3472147_02649 | Not Available | Positive | 2775480 - 2775677 | 7289.38 |
| 50s ribosomal protein l20 | SAMEA3472147_02650 | Not Available | Positive | 2775730 - 2776086 | 13497.7 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3472147_02652 | Not Available | Positive | 2776537 - 2777520 | 36803.9 |
| phenylalanyl-trna synthetase subunit beta | SAMEA3472147_02653 | Not Available | Positive | 2777535 - 2779922 | 87437.2 |
| putative lipoprotein | SAMEA3472147_02704 | Not Available | Positive | 2817097 - 2817561 | 17318.7 |
| putative diguanylate phosphodiesterase | SAMEA3472147_02705 | Not Available | Positive | 2817808 - 2818521 | 27125.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





