Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472147_02635 | Not Available | Positive | 2762385 - 2763152 | 28567.7 |
| putative sodium:dicarboxylate symporter | SAMEA3472147_02636 | Not Available | Negative | 2763156 - 2764547 | 48694.7 |
| putative membrane-bound metal-dependent hydrolase | SAMEA3472147_02637 | Not Available | Negative | 2764680 - 2765270 | 22381.7 |
| putative phosphatase | SAMEA3472147_02638 | Not Available | Negative | 2765433 - 2766101 | 24344.7 |
| inner membrane protein | SAMEA3472147_02639 | Not Available | Positive | 2766248 - 2766784 | 20368.3 |
| putative kinase | SAMEA3472147_02640 | Not Available | Negative | 2766825 - 2767685 | 32460.3 |
| protein | SAMEA3472147_02641 | Not Available | Negative | 2767791 - 2768081 | 10865.6 |
| 6-phosphofructokinase | SAMEA3472147_02642 | Not Available | Negative | 2768182 - 2769111 | 32457.9 |
| putative outer membrane protein, acid-inducible | SAMEA3472147_02643 | Not Available | Positive | 2769398 - 2770156 | 27599.6 |
| putative transmembrane anchor protein | SAMEA3472147_02644 | Not Available | Negative | 2770209 - 2770316 | 4115.44 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





