Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine abc transporter membrane protein | SAMEA3472147_02613 | Not Available | Negative | 2743774 - 2744727 | 35624.8 |
| putrescine abc transporter atp-binding protein | SAMEA3472147_02614 | Not Available | Negative | 2744737 - 2745870 | 41981.4 |
| putrescine abc transporter substrate-binding protein | SAMEA3472147_02615 | Not Available | Negative | 2745965 - 2747077 | 40814.7 |
| tpr repeat-containing protein | SAMEA3472147_02616 | Not Available | Negative | 2747428 - 2747904 | 17667.1 |
| ribosomal protein s6 modification protein | SAMEA3472147_02617 | Not Available | Negative | 2747992 - 2748894 | 32466.5 |
| nitroreductase a | SAMEA3472147_02618 | Not Available | Negative | 2748955 - 2749677 | 26848.2 |
| inner membrane protein | SAMEA3472147_02619 | Not Available | Negative | 2749661 - 2749930 | 9928.76 |
| glutaredoxin | SAMEA3472147_02620 | Not Available | Positive | 2750090 - 2750347 | 9695.39 |
| inner membrane protein ybjm | SAMEA3472147_02621 | Not Available | Negative | 2750377 - 2750754 | 14204.0 |
| putative transport protein with two rck domains | SAMEA3472147_02622 | Not Available | Positive | 2751024 - 2752709 | 60371.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





