Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp oxidoreductase, nadh-dependent | SAMEA3472147_02593 | Not Available | Positive | 2722889 - 2723857 | 35879.0 |
| pyruvate oxidase | SAMEA3472147_02594 | Not Available | Positive | 2723990 - 2725708 | 61998.9 |
| low specificity l-threonine aldolase | SAMEA3472147_02595 | Not Available | Positive | 2725745 - 2726746 | 36447.7 |
| nad(p)-binding rossmann-fold domain | SAMEA3472147_02596 | Not Available | Positive | 2726757 - 2728187 | 53722.2 |
| nucleotide di-p-sugar epimerase or dehydratase | SAMEA3472147_02597 | Not Available | Positive | 2728286 - 2729299 | 38115.9 |
| putative n-acetylmuramoyl-l-alanine amidase | SAMEA3472147_02598 | Not Available | Negative | 2729296 - 2730126 | 31095.2 |
| conserved protein, upf0145 family | SAMEA3472147_02599 | Not Available | Negative | 2730123 - 2730446 | 11437.7 |
| putative type iii effector protein (pentapeptide repeat protein) | SAMEA3472147_02600 | Not Available | Negative | 2730657 - 2732459 | 69426.8 |
| lipoprotein | SAMEA3472147_02601 | Not Available | Positive | 2733083 - 2733598 | 18907.2 |
| arginine transport system atp-binding protein | SAMEA3472147_02602 | Not Available | Positive | 2733816 - 2734544 | 27023.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





